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ORCIDMargaret Staton
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Journal Articles
- 2025
[j16]Annarita Marrano, Leyla Cabugos
, Alenka Hafner, Beant Kapoor, John McNamara, Megan O'donnell, Leonore Reiser, Marcela Karey Tello-Ruiz, Huiting Zhang, Margaret Staton:
A teaching and training framework to promote findable, accessible, interoperable, and reusable data generation in agriculture. Database J. Biol. Databases Curation 2025 (2025)- 2024
- [j15]Ryan D. Kuster, Margaret Staton:
Readsynth: short-read simulation for consideration of composition-biases in reduced metagenome sequencing approaches. BMC Bioinform. 25(1): 191 (2024) - 2022
- [j14]Carolyn J. Lawrence-Dill, Robyn L. Allscheid, Albert Boaitey, Todd Bauman, Edward S. Buckler IV, Jennifer L. Clarke, Christopher Cullis, Jack Dekkers, Cassandra J. Dorius, Shawn F. Dorius, David Ertl, Matthew Homann, Guiping Hu, Mary Losch, Eric Lyons, Brenda Murdoch, Zahra-Katy Navabi, Somashekhar Punnuri, Fahad Rafiq, James M. Reecy, Patrick S. Schnable, Nicole M. Scott, Moira Sheehan, Xavier Sirault, Margaret Staton, Christopher K. Tuggle, Alison Van Eenennaam, Rachael Voas:
Ten simple rules to ruin a collaborative environment. PLoS Comput. Biol. 18(4) (2022) - 2021
- [j13]Margaret Staton, Ethalinda Cannon, Lacey-Anne Sanderson, Jill L. Wegrzyn, Tavis K. Anderson, Sean Buehler, Irene Cobo-Simón, Kay Faaberg, Emily S. Grau, Valentin Guignon, Jessica Gunoskey, Blake Inderski, Sook Jung, Kelly Lager, Dorrie Main, Monica Poelchau, Risharde Ramnath, Peter Richter, Joe West, Stephen P. Ficklin:
Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases. Briefings Bioinform. 22(6) (2021) - 2020
- [j12]Bradford Condon, Abdullah Almsaeed, Sean Buehler, Christopher P. Childers, Stephen P. Ficklin, Margaret E. Staton, Monica Poelchau:
Tripal EUtils: a Tripal module to increase exchange and reuse of genome assembly metadata. Database J. Biol. Databases Curation 2020: baz143 (2020) - 2019
- [j11]Taylor Falk, Nic Herndon, Emily S. Grau, Sean Buehler, Peter Richter, Sumaira Zaman, Eliza M. Baker, Risharde Ramnath, Stephen P. Ficklin, Margaret Staton, Frank Alex Feltus, Sook Jung, Doreen Main, Jill L. Wegrzyn:
Growing and cultivating the forest genomics database, TreeGenes. Database J. Biol. Databases Curation 2019: baz043 (2019) - [j10]Shawna Spoor, Chun-Huai Cheng, Lacey-Anne Sanderson, Bradford Condon, Abdullah Almsaeed, Ming Chen, Anthony Bretaudeau, Helena Rasche, Sook Jung, Dorrie Main, Kirstin E. Bett, Margaret Staton, Jill L. Wegrzyn, F. Alex Feltus, Stephen P. Ficklin:
Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases. Database J. Biol. Databases Curation 2019: baz077 (2019) - [j9]Katheryn Buble, Sook Jung, Jodi L. Humann, Jing Yu, Chun-Huai Cheng, Taein Lee, Stephen P. Ficklin, Heidi Hough, Bradford Condon, Margaret E. Staton, Jill L. Wegrzyn, Dorrie Main:
Tripal MapViewer: A tool for interactive visualization and comparison of genetic maps. Database J. Biol. Databases Curation 2019: baz100 (2019) - [j8]Sook Jung, Taein Lee, Chun-Huai Cheng, Katheryn Buble, Ping Zheng, Jing Yu, Jodi L. Humann, Stephen P. Ficklin, Ksenija Gasic, Kristin Scott, Morgan Frank, Sushan Ru, Heidi Hough, Kate Evans, Cameron Peace, Mercy A. Olmstead, Lisa W. DeVetter, James McFerson, Michael Coe, Jill L. Wegrzyn, Margaret E. Staton, Albert G. Abbott, Dorrie Main:
15 years of GDR: New data and functionality in the Genome Database for Rosaceae. Nucleic Acids Res. 47(Database-Issue): D1137-D1145 (2019) - 2018
- [j7]Taylor Falk, Nic Herndon, Emily S. Grau, Sean Buehler, Peter Richter, Sumaira Zaman, Eliza M. Baker, Risharde Ramnath, Stephen P. Ficklin, Margaret Staton, Frank Alex Feltus, Sook Jung, Doreen Main, Jill L. Wegrzyn:
Growing and cultivating the forest genomics database, TreeGenes. Database J. Biol. Databases Curation 2018: bay084 (2018) - [j6]Lisa C. Harper, Jacqueline D. Campbell, Ethalinda K. S. Cannon, Sook Jung, Monica Poelchau, Ramona L. Walls, Carson M. Andorf, Elizabeth Arnaud, Tanya Z. Berardini, Clayton L. Birkett, Steven B. Cannon, James D. Carson, Bradford Condon, Laurel Cooper, Nathan A. Dunn, Christine G. Elsik, Andrew D. Farmer, Stephen P. Ficklin, David M. Grant, Emily S. Grau, Nic Herndon, Zhi-Liang Hu, Jodi L. Humann, Pankaj Jaiswal, Clément Jonquet, Marie-Angélique Laporte, Pierre Larmande, Gerard R. Lazo, Fiona McCarthy, Naama Menda, Christopher J. Mungall, Monica C. Munoz-Torres, Sushma Naithani, Rex T. Nelson, Daureen Nesdill, Carissa A. Park, James M. Reecy, Leonore Reiser, Lacey-Anne Sanderson, Taner Z. Sen, Margaret Staton, Sabarinath Subramaniam, Marcela Karey Tello-Ruiz, Victor Unda, Deepak R. Unni, Liya Wang, Doreen Ware, Jill L. Wegrzyn, Jason Williams, Margaret Woodhouse, Jing Yu, Doreen Main:
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. Database J. Biol. Databases Curation 2018: bay088 (2018) - [j5]Bradford Condon, Abdullah Almsaeed, Ming Chen, Joe West, Margaret Staton:
Tripal Developer Toolkit. Database J. Biol. Databases Curation 2018: bay099 (2018) - 2017
- [j4]Ming Chen, Nathan Henry, Abdullah Almsaeed, Xiao Zhou, Jill L. Wegrzyn, Stephen P. Ficklin, Margaret Staton:
New extension software modules to enhance searching and display of transcriptome data in Tripal databases. Database J. Biol. Databases Curation 2017: bax052 (2017) - 2011
- [j3]Stephen P. Ficklin, Lacey-Anne Sanderson, Chun-Huai Cheng, Margaret Staton, Taein Lee, Ilhyung Cho, Sook Jung, Kirstin E. Bett, Doreen Main:
Tripal: a construction toolkit for online genome databases. Database J. Biol. Databases Curation 2011 (2011) - 2008
- [j2]Sook Jung, Margaret Staton, Taein Lee, Anna V. Blenda, Randall Svancara, Albert G. Abbott, Dorrie Main:
GDR (Genome Database for Rosaceae): integrated web-database for Rosaceae genomics and genetics data. Nucleic Acids Res. 36(Database-Issue): 1034-1040 (2008) - 2004
- [j1]Sook Jung, Christopher Jesudurai, Margaret Staton, Zhidian Du, Stephen P. Ficklin, Ilhyung Cho, Albert G. Abbott, Jeffrey Tomkins, Dorrie Main:
GDR (Genome Database for Rosaceae): integrated web resources for Rosaceae genomics and genetics research. BMC Bioinform. 5: 130 (2004)
Conference and Workshop Papers
- 2003
- [c1]Roy P. Pargas, James C. Witte, Laura Brand, Catherine Hochrine, Margaret Staton:
OnQ: An Authoring Tool for Dynamic Online Surveys. ITCC 2003: 717-723
Parts in Books or Collections
- 2018
- [p1]Nic Herndon, Taylor Falk, Emily S. Grau, Sook Jung, Stephen P. Ficklin, Dorrie Main, Margaret E. Staton, Jill L. Wegrzyn:
Association Mapping for Forest Trees with CartograTree. Application of Semantic Technology in Biodiversity Science 2018: 137-149
Informal and Other Publications
- 2016
- [i1]Nic Herndon, Emily S. Grau, Iman Batra, Steven A. Demurjian, Hans A. Vasquez-Gross, Margaret E. Staton, Jill L. Wegrzyn:
CartograTree: Enabling landscape genomics for forest trees. PeerJ Prepr. 4: e2345 (2016)
Coauthor Index
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