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ORCIDInternational Journal of Bioinformatics Research and Applications (IJBRA), Volume 2
Volume 2, Number 1, 2006
- Bradley M. Broom, T. J. McDonnell, Devika Subramanian
:
Predicting altered pathways using extendable scaffolds. 3-18 - Jesse Mecham, Mark J. Clement, Quinn Snell, Todd Freestone, Kevin D. Seppi, Keith A. Crandall:
Jumpstarting phylogenetic analysis. 19-35 - Raja Loganantharaj:
Discriminating TATA box from putative TATA boxes in plant genome. 36-51 - Janet Siebert, Krzysztof J. Cios, M. Karen Newell:
A rich analytical environment for flow cytometry experimental results. 52-62 - Jugal K. Kalita, Kaushal Chandrashekar, Reena Hans, P. Selvam, M. Karen Newell:
Computational modelling and simulation of the immune system. 63-88 - Matthew J. Zukoski, Terrance E. Boult, Tunc Iyriboz:
A novel approach to medical image compression. 89-103
Volume 2, Number 2, 2006
- Jian Guo, Yuanlie Lin, Zhirong Sun:
Protein sub-cellular localisation prediction by analysis of short-range residue correlations. 105-118 - Scott F. Smith:
Homology search with binary and trinary scoring matrices. 119-131 - Shibin Qiu, Terran Lane:
RNA string kernels for RNAi off-target evaluation. 132-146 - Guohui Lin, Xiang Wan, Theodore Tegos, Yingshu Li:
Statistical evaluation of NMR backbone resonance assignment. 147-160 - Ruhong Zhou, Ajay K. Royyuru, Prasanna Athma, Frank Suits, B. David Silverman:
Magnitude and spatial orientation of the hydrophobic moments of multi-domain proteins. 161-176 - Tuan D. Pham:
Handling missing DNA microarray data by kriging estimators. 177-192 - Seoung Bum Kim, Kwok-Leung Tsui, Mark Borodovsky:
Multiple testing in large-scale contingency tables: inferring patterns of pair-wise amino acid association in beta-sheets. 193-217
Volume 2, Number 3, 2006
- Xiaomeng Wu, Xiu-Feng Wan, Gang Wu, Dong Xu, Guohui Lin:
Phylogenetic analysis using complete signature information of whole genomes and clustered Neighbour-Joining method. 219-248 - Sunil K. Mathur, Atul M. Doke, Ajit Sadana:
Identification of hair cycle-associated genes from time-course gene expression profile using fractal analysis. 249-258 - Yuan-Shun Dai, Mathew J. Palakal, Shielly Hartanto, Xiaolong Wang, Yanming Guo:
A Grid-Based Pseudo-Cache solution for MISD biomedical problems with high confidentiality and efficiency. 259-281 - Rajesh Chowdhary, Limsoon Wong, Vladimir B. Bajic:
Finding functional promoter motifs by computational methods: a word of caution. 282-288 - Yinglei Song, Chunmei Liu, Russell L. Malmberg, Congzhou He, Liming Cai:
Memory efficient alignment between RNA sequences and stochastic grammar models of pseudoknots. 289-304 - Svetlana Ekisheva, Mark Borodovsky:
Probabilistic models for biological sequences: selection and Maximum Likelihood estimation. 305-324 - Xiaohua Hu:
GE-Miner: integration of cluster ensemble and text mining for comprehensive gene expression analysis. 325-338
Volume 2, Number 4, 2006
- Fumihiko Ino, Yasuhiro Kawasaki, Takahito Tashiro, Yoshikazu Nakajima, Yoshinobu Sato, Shinichi Tamura, Kenichi Hagihara:
A parallel implementation of 2-D/3-D image registration for computer-assisted surgery. 341-358 - Yongchang Ji, Dan C. Marinescu:
Rotational and translational alignment errors in 3D reconstruction of virus structures at high resolution. 359-370 - Jörg Bernsdorf, Sarah E. Harrison, Stephen M. Smith, Patricia V. Lawford, D. Rodney Hose:
Concurrent numerical simulation of flow and blood clotting using the lattice Boltzmann technique. 371-380 - Nan Jiang, Wendy Xinyu Wu, Ian Mitchell:
MESSM: a framework for protein fold recognition using Neural Networks and Support Vector Machines. 381-393 - Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell, Darran Nathan, Ralf Clemens:
High-speed Multiple Sequence Alignment on a reconfigurable platform. 394-406 - Yuri Dotsenko, Cristian Coarfa, Luay Nakhleh, John M. Mellor-Crummey, Usman Roshan:
PRec-I-DCM3: a parallel framework for fast and accurate large-scale phylogeny reconstruction. 407-419 - Yiming Li:
Numerical solutions of a master equation for protein folding kinetics. 420-429 - Xiandong Meng, Vipin Chaudhary:
Optimised fine and coarse parallelism for sequence homology search. 430-441
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