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ORCIDComputational Biology and Chemistry, Volume 61
Volume 61, April 2016
- Sara Hamzelou
, Hossein Askari, Nona Abolfathi Nobari:
Deceptive responsive genes in gel-based proteomics. 1-7 - L. F. O. Rocha:
Analysis of molecular structures and mechanisms for toxins derived from venomous animals. 8-14 - Zhengting Wang, Lei Wang, Rong Fan, Jie Zhou, Jie Zhong:
Molecular design and structural optimization of potent peptide hydroxamate inhibitors to selectively target human ADAM metallopeptidase domain 17. 15-22 - Leonardo D. Garma, André H. Juffer:
Comparison of non-sequential sets of protein residues. 23-38 - Surya Pratap Singh, Dwijendra K. Gupta:
Dynamic conformational ensembles regulate casein kinase-1 isoforms: Insights from molecular dynamics and molecular docking studies. 39-46 - Subramanian Karunagaran, Subramaniyan Subhashchandrabose, Keun Woo Lee, Chandrasekaran Meganathan:
Investigation on the isoform selectivity of novel kinesin-like protein 1 (KIF11) inhibitor using chemical feature based pharmacophore, molecular docking, and quantum mechanical studies. 47-61 - Pravin Prakash, Raja Rajakani, Vikrant Gupta:
Transcriptome-wide identification of Rauvolfia serpentina microRNAs and prediction of their potential targets. 62-74 - Christoph Zimmer, Sven Sahle:
Comparison of approaches for parameter estimation on stochastic models: Generic least squares versus specialized approaches. 75-85 - Rahul D. Kamble, Rohan J. Meshram, Shrikant V. Hese, Rahul A. More, Sonali S. Kamble, Rajesh N. Gacche, Bhaskar S. Dawane:
Synthesis and in silico investigation of thiazoles bearing pyrazoles derivatives as anti-inflammatory agents. 86-96 - Vishwambhar Vishnu Bhandare, Amutha Ramaswamy:
Identification of possible siRNA molecules for TDP43 mutants causing amyotrophic lateral sclerosis: In silico design and molecular dynamics study. 97-108 - Kamil Kwarciak, Marcin Radom, Piotr Formanowicz:
A multilevel ant colony optimization algorithm for classical and isothermic DNA sequencing by hybridization with multiplicity information available. 109-120 - Srijoni Banerjee, Parag A. Deshpande:
On origin and evolution of carbonic anhydrase isozymes: A phylogenetic analysis from whole-enzyme to active site. 121-129 - Bashir Sajo Mienda, Mohd Shahir Shamsir, Rosli Md. Illias:
Model-guided metabolic gene knockout of gnd for enhanced succinate production in Escherichia coli from glucose and glycerol substrates. 130-137 - Santosh S. Chhajed, Sandeep S. Sonawane, Chandrashekhar D. Upasani, Sanjay J. Kshirsagar, Pramodkumar P. Gupta:
Design, synthesis and molecular modeling studies of few chalcone analogues of benzimidazole for epidermal growth factor receptor inhibitor in search of useful anticancer agent. 138-144 - Mosé Casalegno, Guido Sello:
Carcinogenicity prediction of noncongeneric chemicals by augmented top priority fragment classification. 145-154 - Marie-Amandine Laurent, Dominique Bonnier, Nathalie Théret, Pierre Tufféry, Gautier Moroy:
In silico characterization of the interaction between LSKL peptide, a LAP-TGF-beta derived peptide, and ADAMTS1. 155-161 - Mahmood A. Rashid, Sumaiya Iqbal, Firas Khatib, Md. Tamjidul Hoque, Abdul Sattar:
Guided macro-mutation in a graded energy based genetic algorithm for protein structure prediction. 162-177 - Nikita Basant, Shikha Gupta, Kunwar P. Singh:
Predicting human intestinal absorption of diverse chemicals using ensemble learning based QSAR modeling approaches. 178-196 - Aleksei Kuznetsov, Rait Kivi, Jaak Järv:
Computational modeling of acrylodan-labeled cAMP dependent protein kinase catalytic subunit unfolding. 197-201 - Jianjun Tan, Hongling Yuan, Chunhua Li, Xiaoyi Zhang, Cunxin Wang:
Insights into the Functions of M-T Hook Structure in HIV Fusion Inhibitor Using Molecular Modeling. 202-209 - Amnah Siddiqa, Jamil Ahmad, Amjad Ali, Rehan Zafar Paracha, Zurah Bibi, Babar Aslam:
Structural characterization of ANGPTL8 (betatrophin) with its interacting partner lipoprotein lipase. 210-220 - Ze Liu, Jiuqiang Han, Hongqiang Lv, Jun Liu, Ruiling Liu:
Computational identification of circular RNAs based on conformational and thermodynamic properties in the flanking introns. 221-225 - Hitesh S. Thakare, Dilip B. Meshram, Chandrakant M. Jangam, Pawan Labhasetwar, Kunal Roychoudhary, Arun B. Ingle:
Comparative genomics for understanding the structure, function and sub-cellular localization of hypothetical proteins in Thermanerovibrio acidaminovorans DSM 6589 (tai). 226-228 - Deqing Gu, Cheng Zhang, Shengguo Zhou, Liujing Wei, Qiang Hua:
IdealKnock: A framework for efficiently identifying knockout strategies leading to targeted overproduction. 229-237 - He-Li Cao, Hao Chen, Yu-Hui Cui, Heng-Li Tian, Jiong Chen:
Structure-based design and confirmation of peptide ligands for neuronal polo-like kinase to promote neuroregeneration. 238-244 - Sijia Wu, Jiuqiang Han, Ruiling Liu, Jun Liu, Hongqiang Lv:
A computational model for predicting fusion peptide of retroviruses. 245-250 - Xiao-Dong Yu, Rui Yang, Chang-Jun Leng:
Truncation, modification, and optimization of MIG6segment 2 peptide to target lung cancer-related EGFR. 251-257 - Elizabeth Misas, José Fernando Muñoz, Juan Esteban Gallo, Juan Guillermo McEwen, Oliver Keatinge Clay:
From NGS assembly challenges to instability of fungal mitochondrial genomes: A case study in genome complexity. 258-269 - Md. Masud Parvege, Monzilur Rahman, Yead Morshed Nibir, Mohammad Shahnoor Hossain:
Two highly similar LAEDDTNAQKT and LTDKIGTEI epitopes in G glycoprotein may be useful for effective epitope based vaccine design against pathogenic Henipavirus. 270-280
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