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CIBCB 2011: Paris, France
- Clare Bates Congdon, Steven M. Corns, Jennifer A. Smith:

Proceedings of the 2011 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2011, Paris, France, April 11-15, 2011. IEEE 2011, ISBN 978-1-4244-9896-3
Sequence Analysis and Gene Finding
- Bo Chen, Ping Ji

:
Predicting coding region candidates in the DNA sequence based on visualization without training. 1-6 - Leong Lee, Jennifer L. Leopold, Ronald L. Frank:

Protein secondary structure prediction using BLAST and Relaxed Threshold Rule Induction from Coverings. 7-14 - Ke Zhi Mao

, Feng Yang, Wenyin Tang:
Regularized linear discriminant analysis and its recursive implementation for gene subset selection. 15-21 - Wenbo Jiang, Kay C. Wiese:

Combined covariance model for non-coding RNA gene finding. 22-26 - Nicholas George Erho, Kay C. Wiese:

Secondary structure element voting for RNA gene finding. 27-34 - Edward W. Lowe, Mariusz Butkiewicz, Matthew Spellings, Albert Omlor, Jens Meiler:

Comparative analysis of machine learning techniques for the prediction of logP. 35-40
Poster Session
- Nafiseh Forouzideh, Maryam Tayefeh Mahmoudi, Kambiz Badie:

Organizational texts classification using artificial immune recognition systems. 41-48 - Alessandro Gherardi

, Alessandro Bevilacqua
, Filippo Piccinini
:
Illumination field estimation through background detection in optical microscopy. 49-54 - Ludovico Carozza, Alessandro Bevilacqua

, Filippo Piccinini
:
An incremental method for mosaicing of optical microscope imagery. 55-60 - Daniel A. Ashlock, Andrew McEachern:

A simulation of bacterial communities. 61-68 - Mika Sato-Ilic:

Generalized operators and its application to a nonlinear fuzzy clustering model. 69-75
Novel Applications of Computational Intelligence
- Daniel A. Ashlock, Elisabeth Shiller:

Fitting contact networks to epidemic behavior with an evolutionary algorithm. 76-83 - Chengpeng Bi:

Tackling the challenging motif problem through hybrid particle swarm optimized alignment clustering. 84-91 - John Orth, Sheridan K. Houghten:

Optimizing the Salmon Algorithm for the construction of DNA error-correcting codes. 102-108 - Wendy Ashlock, Daniel A. Ashlock:

Designing artificial organisms for use in biological simulations. 109-116
Computational Solutions of Biological Problems
- Fei Hu, Nan Gao, Meng Zhang, Jijun Tang:

Maximum likelihood phylogenetic reconstruction using gene order encodings. 117-122 - Chengpeng Bi, Mara Becker, J. Steven Leeder

:
Derivation of minimum best sample size from microarray data sets: A Monte Carlo approach. 129-134 - Jian Shi, William Arndt, Fei Hu, Jijun Tang:

Isolating - a new resampling method for gene order data. 135-140 - Anirban Mukhopadhyay

, Ujjwal Maulik
, Sanghamitra Bandyopadhyay:
Discovery of MicroRNA markers: An SVM-based multiobjective feature selection approach. 141-145
Applications of CI to Biomedical Problems
- Bongile Mzenda, David J. Brown, Alexander E. Gegov:

Improving the transparency in fuzzy modelling of radiotherapy margins in cancer treatment. 146-153 - Andrej Gisbrecht, Barbara Hammer

, Frank-Michael Schleif
, Xibin Zhu:
Accelerating kernel clustering for biomedical data analysis. 154-161 - Duong Dai Doan, Yunli Wang, Youlian Pan

:
Utilization of gene ontology in semi-supervised clustering. 162-168 - Elizabeth A. Cudney

, Steven M. Corns
:
A comparison of Finite State Classifier and Mahalanobis-Taguchi System for multivariate pattern recognition in skin cancer detection. 169-175 - Alton B. Coalter, Jennifer L. Leopold:

ROAR: A Reference Ontology for Anatomical Relations. 176-183 - Zhen Wang, Parvin Mousavi

:
Reverse engineering of gene regulatory networks: A systems approach. 184-189

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