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BioNLP@HLT-NAACL 2009: Boulder, Colorado, USA
- Kevin Bretonnel Cohen, Dina Demner-Fushman, Sophia Ananiadou, John Pestian, Jun'ichi Tsujii, Bonnie L. Webber:

Proceedings of the BioNLP Workshop, BioNLP@HLT-NAACL 2009, Boulder, Colorado, USA, June 4-5, 2009. Association for Computational Linguistics 2009, ISBN 978-1-932432-30-5 - Sampo Pyysalo, Tomoko Ohta, Jin-Dong Kim, Jun'ichi Tsujii:

Static Relations: a Piece in the Biomedical Information Extraction Puzzle. 1-9 - Danielle L. Mowery, Henk Harkema, John N. Dowling, Jonathan L. Lustgarten, Wendy W. Chapman:

Distinguishing Historical from Current Problems in Clinical Reports - Which Textual Features Help? 10-18 - Lee M. Christensen, Henk Harkema, Peter J. Haug, Jeannie Yuhaniak Irwin, Wendy W. Chapman:

ONYX: A System for the Semantic Analysis of Clinical Text. 19-27 - Roser Morante, Walter Daelemans:

Learning the Scope of Hedge Cues in Biomedical Texts. 28-36 - Udo Hahn, Katrin Tomanek, Ekaterina Buyko, Jung-Jae Kim, Dietrich Rebholz-Schuhmann:

How Feasible and Robust is the Automatic Extraction of Gene Regulation Events? A Cross-Method Evaluation under Lab and Real-Life Conditions. 37-45 - Wern Wong, David Martínez, Lawrence Cavedon:

Extraction of Named Entities from Tables in Gene Mutation Literature. 46-54 - He Tan, Patrick Lambrix:

Selecting an Ontology for Biomedical Text Mining. 55-62 - Rong Xu, Alexander A. Morgan, Amar K. Das, Alan M. Garber:

Investigation of Unsupervised Pattern Learning Techniques for Bootstrap Construction of a Medical Treatment Lexicon. 63-70 - Mark Stevenson, Yikun Guo, Abdulaziz Alamri, Robert J. Gaizauskas:

Disambiguation of Biomedical Abbreviations. 71-79 - Thomas Kappeler, Kaarel Kaljurand, Fabio Rinaldi:

TX Task: Automatic Detection of Focus Organisms in Biomedical Publications. 80-88 - Thierry Hamon, Natalia Grabar:

Exploring Graph Structure for Detection of Reliability Zones within Synonym Resources: Experiment with the Gene Ontology. 89-96 - Feng Jin, Minlie Huang, Zhiyong Lu, Xiaoyan Zhu:

Towards Automatic Generation of Gene Summary. 97-105 - Tomoko Ohta, Jin-Dong Kim, Sampo Pyysalo, Yue Wang, Jun'ichi Tsujii:

Incorporating GENETAG-style annotation to GENIA corpus. 106-107 - Lin Sun, Anna Korhonen, Ilona Silins, Ulla Stenius:

User-Driven Development of Text Mining Resources for Cancer Risk Assessment. 108-116 - Esra Erdem, Reyyan Yeniterzi:

Transforming Controlled Natural Language Biomedical Queries into Answer Set Programs. 117-124 - Vijayaraghavan Bashyam, Ricky K. Taira:

Incorporating Syntactic Dependency Information towards Improved Coding of Lengthy Medical Concepts in Clinical Reports. 125-132 - Haibin Liu, Christian Blouin, Vlado Keselj:

Identifying Interaction Sentences from Biological Literature Using Automatically Extracted Patterns. 133-141 - Mike Conway, Son Doan, Nigel Collier:

Using Hedges to Enhance a Disease Outbreak Report Text Mining System. 142-143 - Aurélie Névéol, Won Kim, W. John Wilbur, Zhiyong Lu:

Exploring Two Biomedical Text Genres for Disease Recognition. 144-152 - Annette Leonhard:

Towards Retrieving Relevant Information for Answering Clinical Comparison Questions. 153-161 - Sumire Uematsu, Jin-Dong Kim, Jun'ichi Tsujii:

Bridging the Gap between Domain-Oriented and Linguistically-Oriented Semantics. 162-170 - Yonggang Cao, John W. Ely, Lamont D. Antieau, Hong Yu:

Evaluation of the Clinical Question Answering Presentation. 171-178 - Pawel Matykiewicz, Wlodzislaw Duch, John Pestian:

Clustering Semantic Spaces of Suicide Notes and Newsgroups Articles. 179-184 - Eiji Aramaki, Yasuhide Miura, Masatsugu Tonoike, Tomoko Ohkuma, Hiroshi Mashuichi, Kazuhiko Ohe:

TEXT2TABLE: Medical Text Summarization System Based on Named Entity Recognition and Modality Identification. 185-192 - Maria Liakata, Claire Q, Larisa N. Soldatova:

Semantic Annotation of Papers: Interface & Enrichment Tool (SAPIENT). 193-200

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